alifestd_is_working_format_asexual

alifestd_is_working_format_asexual(phylogeny_df, mutate: bool = False) → DataFrame

Test if phylogeny_df is an asexual phylogeny in working format.

The working format is a dataframe with the following properties:

• topologically sorted (i.e., organisms appear after all ancestors),

• contiguous ids (i.e., organisms’ ids correspond to row number), and

• contains an integer datatype ancestor_id column.