alifestd_drop_topological_sensitivity

alifestd_drop_topological_sensitivity(phylogeny_df: DataFrame, mutate: bool = False, *, insert: bool = True, delete: bool = True, update: bool = True) → DataFrame

Drop columns from phylogeny_df that may be invalidated by topological operations such as collapsing unifurcations.

Parameters

phylogeny_dfpandas.DataFrame

The phylogeny as a dataframe in alife standard format.

mutatebool, default False

Are side effects on the input argument allowed?

insertbool, default True

Drop columns sensitive to node insertion.

deletebool, default True

Drop columns sensitive to node deletion.

updatebool, default True

Drop columns sensitive to ancestor relationship updates.

Input dataframe is not mutated by this operation unless mutate set True. If mutate set True, operation does not occur in place; still use return value to get transformed phylogeny dataframe.

See Also

alifestd_drop_topological_sensitivity_polars :

Polars-based implementation.